Information for 9-TGTGCACRGCAGC (Motif 16)

A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C
Reverse Opposite:
A T C G A T G C C A G T A C T G T A G C G A T C A C T G A C G T A C T G A T G C C T G A A T G C T C G A
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.672
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.4 +/- 24.2bp
Average Position of motif in Background55.9 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGTGCACRGCAGC---
AATCGCACTGCATTCCG
 A C G T A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTGCACRGCAGC---
----CACAGCAGGGGG
 A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTGCACRGCAGC-----
---DCHCAGCAGGRGGCC
 A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTGCACRGCAGC---
-GAGCACAGCAGGACA
 A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGTGCACRGCAGC
GCCGCGCAGTGCGT-
 A C G T A C G T A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTGCACRGCAGC---
-CCACACAGCAGGAGA
 A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTGCACRGCAGC
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TGTGCACRGCAGC-
----CGCAGCTGCG
 A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

MTF1/MA0863.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGCACRGCAGC
TTTGCACACGGCAC-
 A C G T A C G T A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGTGCACRGCAGC---
-CCACACAGCAGGAGA
 A G C T A T C G G A C T A T C G T A G C G T C A T G A C C T A G A C T G A G T C G T C A A T C G A T G C A C G T A C G T A C G T
A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A