Information for 2-ATAGCCAGCC (Motif 14)

C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C
Reverse Opposite:
C T A G A C T G A T G C A C G T A C T G C A T G A G T C G A C T T G C A G C A T
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.638
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif16.43%
Number of Background Sequences with motif4522.9
Percentage of Background Sequences with motif9.54%
Average Position of motif in Targets51.5 +/- 27.4bp
Average Position of motif in Background50.0 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:ATAGCCAGCC
-----CAGCC
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATAGCCAGCC-
-ATGCCAGACN
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATAGCCAGCC
--TGCCAA--
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATAGCCAGCC
CGTGCCAAG-
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATAGCCAGCC----
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ATAGCCAGCC--
----BCAGACWA
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATAGCCAGCC----
NNATTGACAGGTGCTT
 A C G T A C G T C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATAGCCAGCC
---CACAGN-
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATAGCCAGCC----
----CCAGCTGTTN
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATAGCCAGCC
-ATGCCAACC
 C G T A A C G T C T G A T C A G G T A C G T A C C G T A A T C G T G A C A G T C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C