Information for 4-MTAYKCCTSYCTS (Motif 8)

G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G C T A G A T G C C G T A A C T G C T A G G T C A C T G A A C G T C G T A A C T G
p-value:1e-7
log p-value:-1.794e+01
Information Content per bp:1.825
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.6 +/- 28.7bp
Average Position of motif in Background40.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:MTAYKCCTSYCTS
CTAATCCTCTT--
 G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MTAYKCCTSYCTS-
GTCATGCHTGRCTGS
 A C G T G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-MTAYKCCTSYCTS
GCTAATCC------
 A C G T G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----MTAYKCCTSYCTS
GNNAGCTAATCCCCCN--
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:MTAYKCCTSYCTS
CNAGGCCT-----
 G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:MTAYKCCTSYCTS
--NNACTTGCCTT
 G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-MTAYKCCTSYCTS
NYTAATCCYB----
 A C G T G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:MTAYKCCTSYCTS
-TACACCTGTC--
 G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:MTAYKCCTSYCTS
RYHYACCTGB---
 G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--MTAYKCCTSYCTS
GAATATTCAT-----
 A C G T A C G T G T A C A C G T C G T A A G C T A C G T A G T C A G T C A C G T A T C G A G T C A G T C A C G T A T G C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T A C G T