Information for 3-MTACTTGCWA (Motif 6)

T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
Reverse Opposite:
C A G T C G A T A C T G A G T C C G T A C G T A A C T G A G C T C G T A A C G T
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.823
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif7.29%
Number of Background Sequences with motif131.7
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets62.3 +/- 25.4bp
Average Position of motif in Background47.2 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:MTACTTGCWA-
NNACTTGCCTT
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:MTACTTGCWA
RTACGTGC--
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--MTACTTGCWA
GGGTACGTGC--
 A C G T A C G T T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:MTACTTGCWA
-TACGTGCV-
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----MTACTTGCWA-
ACTTGCTACCTACACC
 A C G T A C G T A C G T A C G T A C G T T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:MTACTTGCWA----
----TTGCAACATN
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MTACTTGCWA
GGACGTGC--
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MTACTTGCWA
NTAATTGN--
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MTACTTGCWA
NTAATTGG--
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MTACTTGCWA
NTAATTGN--
 T G C A A C G T C T G A A G T C A C G T A C G T A C T G A G T C C G T A G T C A
C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C A C G T A C G T