Information for 2-TAAATCVTGTTGGTGH (Motif 3)

A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
Reverse Opposite:
C A T G A T G C C G T A G T A C A G T C C G T A C T G A A T G C C G T A A C G T C T A G C G T A A G C T A C G T C G A T C G T A
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.746
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.3 +/- 17.6bp
Average Position of motif in Background54.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAAATCVTGTTGGTGH
TAAGGCGTCTTG----
 A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAAATCVTGTTGGTGH
NNCTNAATTATGANN----
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:3
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCVTGTTGGTGH
GGCCATAAATCAC--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TAAATCVTGTTGGTGH---
----NNNTGTTGTTGTTNG
 A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCVTGTTGGTGH
NGYCATAAAWCH---------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCVTGTTGGTGH
GGCCATAAATCA---------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TAAATCVTGTTGGTGH
AAAATTGTTATGAA--
 A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----TAAATCVTGTTGGTGH
GGCCATAAATCA---------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TAAATCVTGTTGGTGH
ANCCACCTGTTGCNC-
 A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TAAATCVTGTTGGTGH
CTAATCCTCTT-----
 A C G T C G T A C G T A C T G A C G A T A G T C T C G A A C G T A T C G A G C T A C G T A C T G A C T G C G A T A T C G G A T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T