Information for 1-GCAAAATGTTGTG (Motif 1)

A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C C G T A C T G A G T A C C G T A A G C T A C G T A C G T A C G T T A C G T A G C
p-value:1e-13
log p-value:-3.097e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.3 +/- 27.5bp
Average Position of motif in Background67.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCAAAATGTTGTG-----
---NNNTGTTGTTGTTNG
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCAAAATGTTGTG-----
-NNCTTTGTTTTGNTNNN
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAAAATGTTGTG--
-AAAATTGTTATGAA
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCAAAATGTTGTG----
--GTNTTGTTGTGANNT
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCAAAATGTTGTG--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAAAATGTTGTG---
--TAATTGTTCTAAAC
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAAAATGTTGTG---
TTCAATTGTTCTAAAA
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

GFY(?)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAAAATGTTGTG
GGGAATTGTAGT-
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GCAAAATGTTGTG
ARGAGGMCAAAATGW----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCAAAATGTTGTG
----ATTGTTA--
 A C T G A G T C C G T A C G T A C G T A C T G A A C G T A C T G A G C T A C G T A C T G A C G T C T A G
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T