Information for 4-GGATCTTGCTTTTCKT (Motif 6)

C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
Reverse Opposite:
G C T A G T A C T A C G C T G A C G T A T C G A C G T A A C T G G T A C C G T A T C G A C T A G C G T A C A G T A G T C A G T C
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.695
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif54.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets62.2 +/- 21.5bp
Average Position of motif in Background55.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGATCTTGCTTTTCKT
VAGRACAKNCTGTBC--
 A C G T C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGATCTTGCTTTTCKT
---ACTTCCTGTT---
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGATCTTGCTTTTCKT
NNGCACCTTTCTCC----
 A C G T A C G T C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGATCTTGCTTTTCKT
VAGRACAKWCTGTYC--
 A C G T C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GGATCTTGCTTTTCKT
------NGCTN-----
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCTTTTCKT
-CCCCCTGCTGTG---
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGATCTTGCTTTTCKT
---ACTTTCGTTTCT-
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GGATCTTGCTTTTCKT
---ACTTCCTGNT---
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCTTTTCKT
-NNTCCTGCTGTGNNN
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCTTTTCKT
-NNACTTGCCTT----
 C T A G A C T G G C T A G A C T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T G A C T A G T C A C T G C A G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T