Information for 3-AKSKTGSTGTCMR (Motif 3)

C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G
Reverse Opposite:
A G T C A C T G A C T G C G T A G T A C C G T A A T C G A G T C C G T A G T C A A T C G G T C A A C G T
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.823
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 18.6bp
Average Position of motif in Background41.1 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:AKSKTGSTGTCMR
-----GCTGTCAA
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:AKSKTGSTGTCMR
------NTGTCAN
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AKSKTGSTGTCMR
-----CCTGTCAA
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AKSKTGSTGTCMR---
AACTAGCTGTCAATAC
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AKSKTGSTGTCMR----
TNNNNGGTGTCATNTNT
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AKSKTGSTGTCMR----
NNNCAGCTGTCAATATN
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AKSKTGSTGTCMR-
----VGCTGWCAVB
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:forward strand
Alignment:AKSKTGSTGTCMR--
-------TGTCANYT
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AKSKTGSTGTCMR-
--GGTGYTGACAGS
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AKSKTGSTGTCMR
-----RHTGWCAR
 C G T A A C G T A T G C A C G T A C G T A C T G A T G C A C G T A C T G A C G T A G T C G T A C C T A G
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A