Information for 1-GCAAAATGTTGTG (Motif 2)

A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G
Reverse Opposite:
A G T C C G T A A G T C C G T A C T G A A T G C G C T A G A C T A C G T A C G T A C G T A C T G A T G C
p-value:1e-15
log p-value:-3.570e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.06%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 28.0bp
Average Position of motif in Background55.9 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAATGTTGTG
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCAAAATGTTGTG
GAGCAACAGGTGGTT
 A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCAAAATGTTGTG
ATGCAACAGGTGG--
 A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCAAAATGTTGTG-----
---NNNTGTTGTTGTTNG
 A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAAAATGTTGTG--
-AAAATTGTTATGAA
 A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAATGTTGTG--
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G A C G T A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCAAAATGTTGTG-----
-NNCTTTGTTTTGNTNNN
 A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAAAATGTTGTG
---AACAGCTGTT
 A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G
A C G T A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCAAAATGTTGTG----
--GTNTTGTTGTGANNT
 A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GCAAAATGTTGTG
ATATGCAAAT-------
 A C G T A C G T A C G T A C G T A T C G A G T C C G T A C G T A C G T A C G T A C A G T A T C G A G C T A C G T A C T G A C G T C T A G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T