Information for 1-CAAATATTTGVTTGCA (Motif 1)

A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A C T G A T G C A A C G T C G T A A C G T C G A T A C G T A C T G
p-value:1e-15
log p-value:-3.596e+01
Information Content per bp:1.813
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.05%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.8 +/- 21.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAAATATTTGVTTGCA
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAAATATTTGVTTGCA
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAAATATTTGVTTGCA
GACAGAGATATCAGTGT---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAAATATTTGVTTGCA
----TAATTGATTA--
 A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CAAATATTTGVTTGCA
ATGGGATATATCCGCCT---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CAAATATTTGVTTGCA
NAACATATGTTT-------
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAAATATTTGVTTGCA
-GAATGTTTGTTT---
 A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAAATATTTGVTTGCA
-CCATAATTAATTACA
 A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
A C G T G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CAAATATTTGVTTGCA
ANCATATGTT--------
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---CAAATATTTGVTTGCA
CCAAAAATAG---------
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T C G T A A C G T A G C T C G A T A C T G T A G C A G C T A C G T C T A G G T A C C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T