Information for 3-TTGGTAATGGGAA (Motif 16)

C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C G T C G T A A G T C A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 25.5bp
Average Position of motif in Background70.8 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTGGTAATGGGAA
--GKTAATGR---
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTGGTAATGGGAA
---NTAATTGG--
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A
A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTAATGGGAA--
NNTNNACAATGGGANNN
 A C G T A C G T C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTGGTAATGGGAA--
-----CSTGGGAAAD
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTGGTAATGGGAA
---NTAATTGN--
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGGTAATGGGAA
--GNTAATTANN-
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A
A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTGGTAATGGGAA--
-----NATGGAAAAN
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTGGTAATGGGAA--
-----AATGGAAAAT
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGGTAATGGGAA
--GTTAATGGCC-
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGGTAATGGGAA------
--TATTATGGGATGGATAA
 C G A T G C A T A C T G A C T G C G A T C G T A C G T A A C G T A C T G A C T G A C T G C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A