Information for 3-TGACTRTGGC (Motif 12)

A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C
Reverse Opposite:
A C T G A G T C A G T C C G T A G A C T C G T A A C T G C G A T G A T C T G C A
p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.575
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif264.5
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets46.4 +/- 26.1bp
Average Position of motif in Background52.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGACTRTGGC-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGACTRTGGC-
TGCCTGAGGCN
 A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGACTRTGGC
TTGACTTTT--
 A C G T A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGACTRTGGC-
NGCCTNAGGCN
 A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGACTRTGGC---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGACTRTGGC
--GCTGTG--
 A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGACTRTGGC
TWGTCTGV---
 A C G T A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACTRTGGC-
NGCCTGAGGCN
 A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGACTRTGGC
-GACAATGNN
 A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGACTRTGGC
NCGTGACN-----
 A C G T A C G T A C G T A C G T C T A G G C T A T G A C G C A T C T G A G C A T T C A G T C A G T G A C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T