Information for 1-TTTSWCACAAAAAAGA (Motif 1)

A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C T G A C G T A C T G G C A T T A C G C G T A C G T A C T G A
p-value:1e-14
log p-value:-3.310e+01
Information Content per bp:1.804
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 19.5bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA----
-----AACAAACAACAAGAG
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA
CGAAGCACACAAAATA
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTSWCACAAAAAAGA
TTTTCCCGCCAAAA---
 A C G T A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA--
--AAACAGACAAAGGAAT
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA-
---TACTGGAAAAAAAA
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A A C G T
A C G T A C G T A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA-----
----GTTCAAAAAAAAAATTC
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTSWCACAAAAAAGA
TTTCACACCTN-----
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA
TTTCCCGCCAAA----
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTTSWCACAAAAAAGA
--TBGCACGCAA----
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTTSWCACAAAAAAGA
CTTCACACCTA-----
 A G C T A C G T C G A T A T G C C G A T A G T C C G T A A G T C G T C A T G C A C G T A G T C A C T G A C G T A C T A G C G T A
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T A C G T