Information for 3-TGTGGCCCTCCTGAGG (Motif 11)

G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C G C A T A T G C C G T A A T C G C A T G C T G A A C T G A C T G T A C G A G T C G T A C G T C A G T A C C T G A
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.736
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.7 +/- 28.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TGTGGCCCTCCTGAGG
---CCCCCTGCTGTG-
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TGTGGCCCTCCTGAGG
------CCTGCTGAGH
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTGGCCCTCCTGAGG
-GGCCYCCTGCTGDGH
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGTGGCCCTCCTGAGG--
---TNTCCTGCTGTGNNG
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTGGCCCTCCTGAGG--
---NNTCCTGCTGTGNNN
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGTGGCCCTCCTGAGG--
---TCNCCTGCTGNGNNN
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:TGTGGCCCTCCTGAGG
--CNGTCCTCCC----
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.48
Offset:8
Orientation:forward strand
Alignment:TGTGGCCCTCCTGAGG----
--------SCCTSAGGSCAW
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.48
Offset:9
Orientation:forward strand
Alignment:TGTGGCCCTCCTGAGG
---------GCTGTG-
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:TGTGGCCCTCCTGAGG----
--------GCCTCAGGGCAT
 G A C T A C T G A C G T A C T G T A C G A G T C T G A C A G T C A G C T G A T C A T G C G C A T A T C G C G T A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T