Information for 22-CCCCTGTTGCTTC (Motif 26)

A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A T C G A G T C C G T A G T C A G T A C C G T A A C T G A C T G A C T G A T C G
p-value:1e-5
log p-value:-1.351e+01
Information Content per bp:1.928
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 8.6bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGTTGCTTC
CCACCTGTTGCAT-
 A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGTTGCTTC
ANCCACCTGTTGCNC-
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGTTGCTTC
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGTTGCTTC
CCCCCTGCTGTG--
 A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:forward strand
Alignment:CCCCTGTTGCTTC-
--------GCTTCC
 A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------CCCCTGTTGCTTC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGTTGCTTC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCCTGTTGCTTC
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCCCTGTTGCTTC--
---CAGCTGTTTCCT
 A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGTTGCTTC
ACCACCTGTT-----
 A C G T A C G T A T G C A G T C A G T C A G T C A C G T A C T G A C G T C G A T A C T G A T G C A C G T A C G T A G T C
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T