Information for 20-GTGCTGAGGTCCC (Motif 25)

A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
Reverse Opposite:
A T C G C A T G A C T G G T C A A G T C A G T C A C G T G T A C C G T A A C T G A T G C C G T A A G T C
p-value:1e-7
log p-value:-1.635e+01
Information Content per bp:1.829
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.2 +/- 24.8bp
Average Position of motif in Background59.4 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
----TRAGGTCA-
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGAGGTCCC
AATTTGCTGAC-----
 A C G T A C G T A C G T A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGCTGAGGTCCC
-NGATGACGTCAT
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
-----AAGGTCAC
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
-NRRTGACGTCAT
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

CREB1/MA0018.2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
----TGACGTCA-
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
-NGRTGACGTCAY
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

CRE(bZIP)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
-CGGTGACGTCAC
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTGCTGAGGTCCC
------AGGTCA-
 A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGAGGTCCC
AAAATGCTGACT----
 A C G T A C G T A C G T A C T G C G A T A T C G G T A C A C G T A C T G C G T A A C T G A C T G A C G T A G T C G A T C A T G C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T