Information for 13-TGAGCGHCCBCTGGTG (Motif 21)

A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G
Reverse Opposite:
G T A C C G T A A G T C G T A C G T C A A C T G T A C G A C T G A T C G C T G A G T A C C T A G A T G C A C G T A T G C C T G A
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.813
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.9 +/- 15.1bp
Average Position of motif in Background49.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGAGCGHCCBCTGGTG----
-TAGCGCCCCCTGGTGGCCA
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAGCGHCCBCTGGTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAGCGHCCBCTGGTG----
ANAGTGCCACCTGGTGGCCA
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TGAGCGHCCBCTGGTG--
--------NNCAGGTGNN
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TGAGCGHCCBCTGGTG--
--------NNCAGGTGTN
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:TGAGCGHCCBCTGGTG--
--------NNCAGGTGCG
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGAGCGHCCBCTGGTG
-CAACGTCCGCGG---
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGAGCGHCCBCTGGTG--
------TCCCCTGGGGAC
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGAGCGHCCBCTGGTG------
-----ATCCACAGGTGCGAAAA
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGAGCGHCCBCTGGTG--
----CCCCCCCGGGGGNN
 A G C T A T C G C G T A A T C G A G T C C A T G G A C T A T G C A G T C A G T C A G T C A C G T A C T G A C T G C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G