Information for 17-CCACCGCGGTGGC (Motif 18)

A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
Reverse Opposite:
C T A G A G T C G A T C G T C A A G T C A G T C A T C G G T A C T C A G A C T G A G C T A C T G T A C G
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.752
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif86.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets54.2 +/- 24.0bp
Average Position of motif in Background43.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCACCGCGGTGGC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCACCGCGGTGGC
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCACCGCGGTGGC
CCCCCCCGGGGGGGT
 A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCACCGCGGTGGC
CACCCCCGGGGGGG-
 A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCACCGCGGTGGC
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCACCGCGGTGGC
CCCCCCCGGGGGGGT
 A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCACCGCGGTGGC
GACCCCCCGCGAAG--
 A C G T A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCACCGCGGTGGC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCACCGCGGTGGC
CCCCCTGCTGTG--
 A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACCGCGGTGGC
GCGACCACCGAA-----
 A C G T A C G T A C G T A C G T A T G C A G T C T C G A A G T C A G T C A C T G A T G C C T A G A C T G C A G T C A T G T A C G G A T C
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T A C G T