Information for 12-GCGTGACGCA (Motif 15)

T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
Reverse Opposite:
A C G T A T C G T A G C A C T G A C G T A T G C C T G A T G A C A T C G A G T C
p-value:1e-10
log p-value:-2.380e+01
Information Content per bp:1.553
Number of Target Sequences with motif126.0
Percentage of Target Sequences with motif13.85%
Number of Background Sequences with motif3386.2
Percentage of Background Sequences with motif7.54%
Average Position of motif in Targets55.1 +/- 25.9bp
Average Position of motif in Background50.7 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCGTGACGCA
--ATGACGTA
 T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGTGACGCA
NCGTGACN--
 T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:3
Score:0.68
Offset:-9
Orientation:reverse strand
Alignment:---------GCGTGACGCA
NGCANTCATGCGTGACG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:4
Score:0.66
Offset:-9
Orientation:reverse strand
Alignment:---------GCGTGACGCA
TGCAGTCATGCGTGACG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGTGACGCA
TGCGTG-----
 A C G T T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGACGCA
NNGTCGCGTGNCAC-
 A C G T A C G T A C G T A C G T A C G T T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTGACGCA
TCAGNGAGCGTGAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCGTGACGCA
---TGACGT-
 T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

ATF4/MA0833.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGTGACGCA---
GGATGATGCAATA
 T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A A C G T A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

FOS::JUN/MA0099.2/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGTGACGCA
---TGACTCA
 T C A G T A G C A C T G G A C T T A C G T G C A T G A C A T C G T A G C T G C A
A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A