Information for 16-CAATAAAGTT (Motif 18)

G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C A C G T A G C T A C G T C G T A A C G T A C G T A C T G
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.916
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets48.3 +/- 28.6bp
Average Position of motif in Background41.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CAATAAAGTT---
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CAATAAAGTT--
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAATAAAGTT
GCAATAAAA--
 A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CAATAAAGTT
CCAATAAAAA-
 A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CAATAAAGTT--
AACCCAATAAAATTCG
 A C G T A C G T A C G T A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CAATAAAGTT
AAGCCATAAAA--
 A C G T A C G T A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CAATAAAGTT-
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXB13/MA0901.1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAATAAAGTT
CCAATAAAAC-
 A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAATAAAGTT
CCAATAAAAA-
 A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAATAAAGTT
GTCATAAAAN-
 A C G T G T A C G T C A C G T A A C G T C G T A C T G A C G T A A C T G A G C T A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T