Information for 2-AAAATGTTCTGTTHAT (Motif 3)

C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
Reverse Opposite:
C G T A C G A T C A G T G T C A C G T A A T G C C G T A A T C G C T G A C G T A A G T C C G T A A C G T A C G T A G C T A C G T
p-value:1e-12
log p-value:-2.802e+01
Information Content per bp:1.795
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.7 +/- 32.4bp
Average Position of motif in Background49.2 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTTCTGTTHAT
AAGAACATWHTGTTC--
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTTCTGTTHAT
VAGRACAKNCTGTBC--
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTTCTGTTHAT
AACAATGTGCAGTGTT-
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGTTCTGTTHAT
GACAATGNN--------
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTTCTGTTHAT
VAGRACAKWCTGTYC--
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAAATGTTCTGTTHAT
-GAATGTTTGTTT---
 C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AAAATGTTCTGTTHAT
NNCTTTGTTTTGNTNNN
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:AAAATGTTCTGTTHAT----
--------NTGTTTAYATWW
 C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:AAAATGTTCTGTTHAT
---------TGTTTAC
 C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AAAATGTTCTGTTHAT
AAAATTGTTATGAA---
 A C G T C G T A C T G A C G T A C G T A A C G T C T A G C G A T A G C T A T G C A C G T A T C G A C G T A C G T G A C T C G T A A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T A C G T