Information for 3-ATAGACTATT (Motif 6)

C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C T G C G A T A G T C A C G T C G T A A C G T
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif32.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.8 +/- 25.0bp
Average Position of motif in Background43.2 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATAGACTATT-
NTTATTGATTTTTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATAGACTATT-
ATTATCGATTTTTT
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATAGACTATT
BCAGACWA--
 C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATAGACTATT
AATAAACAATN
 A C G T C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

ONECUT1/MA0679.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATAGACTATT-
ANTATCGATTTTTN
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATAGACTATT
-TTGACTTTT
 C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATAGACTATT---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATAGACTATT-----
TACGAGACTCCTCTAAC
 A C G T A C G T C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATAGACTATT-----
-----CTATTTTTGG
 C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATAGACTATT----
AAAAACCATTAAGG
 C G T A A C G T C G T A A C T G C G T A G T A C A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G