Information for 6-GTTAGAAAAAGTAATA (Motif 12)

A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.939
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 29.9bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTAGAAAAAGTAATA
AAACAGACAAAGGAAT-
 A C G T A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA-
GTTAAAAAAAAAAATTA
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA--
----AAAAAATCAATAAT
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA-
GTTCAAAAAAAAAATTC
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA
TTAAGAACAATAAATT
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Mecom/MA0029.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA
--AAGATAAGATAACA
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA
TTTAGAACAATAAAAT
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GTTAGAAAAAGTAATA--
----AAAAAATCGATAAT
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTTAGAAAAAGTAATA
GAAAGTGAAAGT----
 A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTTAGAAAAAGTAATA
NTTNAGAACAATTA---
 A C G T A C T G A C G T C G A T C G T A C T A G C G T A C G T A G T C A C G T A C G T A A T C G A C G T C G T A C G T A A C G T C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T