Information for 5-TCATATACAC (Motif 10)

C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G A G C T C G T A A C G T C G T A C G A T A C T G G T C A
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.795
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif28.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.2 +/- 24.1bp
Average Position of motif in Background48.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCATATACAC
GHATATKCAT
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCATATACAC
GAATATTCAT
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCATATACAC
----ATCCAC
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCATATACAC-----
TNNATTATGCATANNTT
 A C G T A C G T C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCATATACAC--
--ATATGCAAAT
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C A C G T A C G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCATATACAC---
ATGAATATTCATGAG
 A C G T A C G T C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C A C G T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Foxj2/MA0614.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCATATACAC
--GTAAACAA
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCATATACAC
--GTAAACAA
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCATATACAC
--GTAAACA-
 C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCATATACAC
WWATRTAAACAN
 A C G T A C G T C A G T G T A C C G T A A C G T G T C A A C G T T C G A A G T C C G T A G T A C
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A