Information for 3-SCAAGCKCGGTAGAGC (Motif 12)

A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
Reverse Opposite:
A C T G A T G C A G C T A G T C G C A T G T C A A G T C A G T C T A C G G T A C C A T G A T G C A G C T A C G T A T C G A T C G
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.710
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.0 +/- 24.1bp
Average Position of motif in Background59.6 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:SCAAGCKCGGTAGAGC
--AAGCTTG-------
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.50
Offset:5
Orientation:forward strand
Alignment:SCAAGCKCGGTAGAGC-
-----TGGGGAAGGGCM
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--SCAAGCKCGGTAGAGC
NGTCACGCTTGGCTGC--
 A C G T A C G T A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.47
Offset:3
Orientation:forward strand
Alignment:SCAAGCKCGGTAGAGC
---TGCGTGGGYG---
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:SCAAGCKCGGTAGAGC
----GTGGGGGAGGGG
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
A C G T A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.46
Offset:7
Orientation:forward strand
Alignment:SCAAGCKCGGTAGAGC-
-------TGGAACAGMA
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.46
Offset:4
Orientation:forward strand
Alignment:SCAAGCKCGGTAGAGC
----RGKGGGCGGAGC
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
A C G T A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:reverse strand
Alignment:SCAAGCKCGGTAGAGC
NAGNTCTCGCGAGAN-
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:SCAAGCKCGGTAGAGC
---NGCGTGGGCGGR-
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C
A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.46
Offset:3
Orientation:reverse strand
Alignment:SCAAGCKCGGTAGAGC-
---GGCGGGGGCGGGGG
 A T G C A T G C C G T A C T G A A T C G G A T C C A T G A T G C C T A G A C T G C A G T C G T A A C T G C T G A A T C G T G A C A C G T
A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G