Information for 9-TGGGTCACGC (Motif 7)

A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C
Reverse Opposite:
C A T G A G T C A T C G A C G T A T C G C T G A A G T C T A G C G T A C T G C A
p-value:1e-15
log p-value:-3.594e+01
Information Content per bp:1.840
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.21%
Number of Background Sequences with motif75.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets44.2 +/- 30.7bp
Average Position of motif in Background44.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTCACGC-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:TGGGTCACGC
--AGTCACGC
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TGGGTCACGC-
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:TGGGTCACGC-
-----CACGCA
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TGGGTCACGC--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TGGGTCACGC
-AGGTCA---
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGGGTCACGC-----
-GTGCCACGCGACTG
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGGGTCACGC--
--GGTCACGTGG
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T A C G T
A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGGGTCACGC-------
---GTCACGCTCNCTGA
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

PAX1/MA0779.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGGGTCACGC---------
--CGTCACGCATGACTGCA
 A C G T A C T G A T C G A C T G A G C T A T G C C G T A A T G C A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A