Information for 11-GYCGCCTKTSWGT (Motif 13)

A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
Reverse Opposite:
C G T A T A G C C G A T A T C G C G T A T G A C C G T A A C T G A C T G A G T C A C T G C T G A A G T C
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 17.5bp
Average Position of motif in Background27.6 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GYCGCCTKTSWGT--
---GSCTGTCACTCA
 A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GYCGCCTKTSWGT
NNGTCGCGTGNCAC-
 A C G T A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GYCGCCTKTSWGT
TGACACCTGTCA--
 A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GYCGCCTKTSWGT--
AAGCACCTGTCAATAT
 A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GYCGCCTKTSWGT
TGACACCTGTCA--
 A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GYCGCCTKTSWGT
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GYCGCCTKTSWGT-
----CCTTTGTTTT
 A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

TGIF2/MA0797.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GYCGCCTKTSWGT
TGACAGCTGTCA--
 A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GYCGCCTKTSWGT
NNGGCCACGCCTTTN---
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GYCGCCTKTSWGT
----GCTGTG---
 A C T G A G C T A G T C A C T G A G T C A G T C A C G T A C T G A C G T A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T