Information for 10-AGCMAMTGAG (Motif 10)

C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G
Reverse Opposite:
A G T C A C G T A T G C C T G A A C T G C G A T C A T G C T A G G T A C A G C T
p-value:1e-14
log p-value:-3.380e+01
Information Content per bp:1.717
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.52%
Number of Background Sequences with motif880.1
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets42.3 +/- 24.3bp
Average Position of motif in Background50.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGCMAMTGAG
AGCCAATCGG
 C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGCMAMTGAG
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCMAMTGAG
ACTAGCCAATCA-
 A C G T A C G T A C G T C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCMAMTGAG------
-GNNACCGAGAATNNN
 C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCMAMTGAG------
-TTGACCGAGAATTCC
 C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCMAMTGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCMAMTGAG------
TGGACCAATCAGCACTCT
 A C G T A C G T C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCMAMTGAG-------
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCMAMTGAG------
-NNNACCGAGAGTNNN
 C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCMAMTGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T C T G A A C T G A G T C G T A C C G T A T G A C A G C T A T C G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C