Information for 1-BTTCYNRGAAVNN (Motif 1)

A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
Reverse Opposite:
A C T G C T G A A G C T A G C T G C A T A G T C A G T C T A C G C T A G C T A G C G T A T C G A T C A G
p-value:1e-116
log p-value:-2.689e+02
Information Content per bp:1.544
Number of Target Sequences with motif150.0
Percentage of Target Sequences with motif16.57%
Number of Background Sequences with motif548.1
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets48.6 +/- 22.0bp
Average Position of motif in Background49.3 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:BTTCYNRGAAVNN
TTTCTNAGAAAN-
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:BTTCYNRGAAVNN
-TTCTTGGAAAN-
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-BTTCYNRGAAVNN
ATTTCCNGGAAATN
 A C G T A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:BTTCYNRGAAVNN
TTTCCNGGAAAN-
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-BTTCYNRGAAVNN
NCTTCCNGGAAGNN
 A C G T A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---BTTCYNRGAAVNN
NNNTTTCCTGGAAA--
 A C G T A C G T A C G T A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:7
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:BTTCYNRGAAVNN
TTTCCTGGAAA--
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:BTTCYNRGAAVNN
CTTCCNGGAA---
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:BTTCYNRGAAVNN
TTTCCCAGAAN--
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:BTTCYNRGAAVNN--
TTTCCTGGAAAGNNN
 A G T C A G C T G C A T A G T C G A T C A T G C C T A G C T A G C G T A T C G A T C G A G A C T T G A C A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A