Information for 4-GCCGCCAGAVGGCGCG (Motif 5)

A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G
Reverse Opposite:
T A G C A C T G A G T C C T A G A G T C A G T C A G T C A C G T A G T C C G A T C T A G A C T G G T A C A C T G A C T G A G T C
p-value:1e-15
log p-value:-3.628e+01
Information Content per bp:1.827
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.5 +/- 15.9bp
Average Position of motif in Background48.1 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCGCCAGAVGGCGCG----
GCCASCAGGGGGCGCYVNNG
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCAGAVGGCGCG-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCAGAVGGCGCG--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGAVGGCGCG
-CCGCCCAAGGGCAG-
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCGCCAGAVGGCGCG----
-----ATAAGGGCGCGCGAT
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCGCCAGAVGGCGCG----
-----ATAAAGGCGCGCGAT
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCCGCCAGAVGGCGCG
--TGCCCNGGGGCA--
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:GCCGCCAGAVGGCGCG--
----------GGCGCGCT
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAGAVGGCGCG
CCTTCGGCGCCAAAAGG----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCGCCAGAVGGCGCG
-TCACCTCTGGGCAG-
 A C T G G T A C A G T C A C T G A G T C A G T C C G T A A C T G G T C A T A C G A C T G C T A G A G T C A C T G A G T C A T C G
A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T