Information for 17-CCTAACCTAA (Motif 18)

A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A
Reverse Opposite:
A C G T C G A T G T C A A C T G A C T G A G C T A C G T C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif14.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.8 +/- 19.2bp
Average Position of motif in Background56.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTAACCTAA
NNACTTACCTN-
 A C G T A C G T A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTAACCTAA-----
NWTAAYCYAATCAWN
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T A C G T A C G T A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTAACCTAA
--TGACCTYA
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

DUX4/MA0468.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTAACCTAA---
--TAATTTAATCA
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTAACCTAA--
--TGACCTARTT
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTAACCTAA-----
-TTGACCTANTTATN
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTAACCTAA
CCTCACCTG-
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTAACCTAA-
-NAAACCACAG
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTAACCTAA-
--AAACCGCAA
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCTAACCTAA-
---AACCGANA
 A G T C G T A C C G A T C G T A C T G A A G T C A G T C A C G T G C T A G T C A A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A