Information for 3-TYTACMAMTCARC (Motif 6)

A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T A C T G G T C A A C G T A C G T A C G T A T C G A C G T C G T A C T G A C G T A
p-value:1e-15
log p-value:-3.596e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.7 +/- 22.5bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TYTACMAMTCARC-----
TGGACCAATCAGCACTCT
 A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TYTACMAMTCARC
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TYTACMAMTCARC
----CCAATCAA-
 A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TYTACMAMTCARC
GNNNTTTTACGACCTNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TYTACMAMTCARC
TTATGTACTAATAA--
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TYTACMAMTCARC
--AGCCACTCAAG
 A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TYTACMAMTCARC-
----CAAATCACTG
 A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TYTACMAMTCARC
NTTTTACGACT----
 A C G T A C G T A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TYTACMAMTCARC
NTTTTACGACC----
 A C G T A C G T A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TYTACMAMTCARC
NNNATTTTACGACNNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A T G C G T C A C G T A G T C A A C G T A G T C C G T A C T G A A G T C
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G A C G T