Information for 11-TGGCGGCACT (Motif 18)

A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
Reverse Opposite:
C T G A A C T G A C G T A C T G A G T C T A G C A T C G A G T C A G T C C T G A
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.841
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif142.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets47.4 +/- 30.9bp
Average Position of motif in Background51.1 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGGCACT--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGGCGGCACT
CAAGATGGCGGC---
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGGCGGCACT
TAATGGCGGNC--
 A C G T A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGGCGGCACT---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGGCGGCACT
BTKGGCGGGAAA
 A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGGCACT--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGCGGCACT
CWGGCGGGAA-
 A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCGGCACT
TTTGGCGCCAAA
 A C G T A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGCGGCACT-
-GGCGGGAAAH
 A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGGCGGCACT
TTGGCA-----
 A C G T A G C T A C T G A C T G A T G C A T C G A C T G T G A C T G C A G T A C G A C T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T