Information for 9-CGCTGATTGGCTG (Motif 17)

A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G
Reverse Opposite:
A T G C G T C A A C T G A G T C G T A C G T C A G C T A A G C T A T G C G C T A A T C G T G A C T A C G
p-value:1e-10
log p-value:-2.303e+01
Information Content per bp:1.761
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif64.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets51.2 +/- 20.9bp
Average Position of motif in Background48.1 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG----
--CTGATTGGTCNATTT
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG
--CCGATTGGCT-
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CGCTGATTGGCTG--
---TGATTGGCTANN
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CGCTGATTGGCTG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG-
--BTGABTGACAGS
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG
--TTGATTGN---
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG-
--NTGATTGACAGN
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCTGATTGGCTG
CNGTGATTTN---
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGCTGATTGGCTG-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CGCTGATTGGCTG-
------TWGTCTGV
 A G T C A C T G T A G C C A G T A T C G C T G A C A G T C A G T A C T G T A C G G T A C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G