Information for 2-RTTKTGYAAT (Motif 2)

T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
Reverse Opposite:
T C G A C G A T C A G T C T A G A G T C G C T A G T A C T G C A C T G A A G T C
p-value:1e-63
log p-value:-1.463e+02
Information Content per bp:1.621
Number of Target Sequences with motif158.0
Percentage of Target Sequences with motif19.63%
Number of Background Sequences with motif1479.2
Percentage of Background Sequences with motif3.80%
Average Position of motif in Targets50.9 +/- 26.7bp
Average Position of motif in Background50.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-RTTKTGYAAT
NATTGTGCAAT
 A C G T T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:RTTKTGYAAT
-TTATGCAAT
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:RTTKTGYAAT
RTTATGYAAB
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CEBPE/MA0837.1/Jaspar

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:RTTKTGYAAT
ATTGCGCAAT
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:5
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:RTTKTGYAAT
ATTGCGCAAT
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPD/MA0836.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:RTTKTGYAAT
ATTGCGCAAT
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:RTTKTGYAAT
ATTGCGCAAT
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:RTTKTGYAAT
GTTGCGCAAT
 T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

HLF/MA0043.2/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-RTTKTGYAAT-
NGTTACGTAANN
 A C G T T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T A C G T
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-RTTKTGYAAT
NATGTTGCAA-
 A C G T T C A G G A C T A C G T C A T G C G A T A C T G G A T C G T C A C G T A A G C T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T