p-value: | 1e-10 |
log p-value: | -2.495e+01 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 67.0 +/- 25.0bp |
Average Position of motif in Background | 69.7 +/- 13.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GSCAGMCTTGSTCWYM -BCAGACWA------- |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GSCAGMCTTGSTCWYM -CCAGACRSVB----- |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GSCAGMCTTGSTCWYM AGGTGHCAGACA-------- |
|
|
|
Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GSCAGMCTTGSTCWYM ATGCCAGACN-------- |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GSCAGMCTTGSTCWYM -CCAGACAG------- |
|
|
|
SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 6 |
Score: | 0.49 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GSCAGMCTTGSTCWYM AGGTGNCAGACAG------- |
|
|
|
PB0060.1_Smad3_1/Jaspar
Match Rank: | 7 |
Score: | 0.48 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GSCAGMCTTGSTCWYM CAAATCCAGACATCACA--- |
|
|
|
POL002.1_INR/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GSCAGMCTTGSTCWYM -TCAGTCTT------- |
|
|
|
Nr5a2/MA0505.1/Jaspar
Match Rank: | 9 |
Score: | 0.47 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GSCAGMCTTGSTCWYM GCTGACCTTGAACTN- |
|
|
|
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer
Match Rank: | 10 |
Score: | 0.47 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GSCAGMCTTGSTCWYM-- ---TGCCTGCGYCMCCTT |
|
|
|