Information for 8-CGGCAGCTGCCVCGGG (Motif 13)

A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C G A T C A C T G A G T C A C T G A C T G A T G C C T G A A C T G G T A C C A G T A C T G A G T C A T G C C T A G
p-value:1e-11
log p-value:-2.663e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.5 +/- 17.8bp
Average Position of motif in Background47.6 +/- 48.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGCTGCCVCGGG
CTCAGCAGCTGCTACTG-
 A C G T A C G T A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTGCCVCGGG
-CGCAGCTGCG-----
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTGCCVCGGG
-AGCAGCTGCTNN---
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTGCCVCGGG
-TGCAGCTGTCCCT--
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGCAGCTGCCVCGGG
NNGCAGCTGTC-----
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCTGCCVCGGG
-NVCAGCTGBBNN---
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGGCAGCTGCCVCGGG
-AGCAGCTGCT-----
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCAGCTGCCVCGGG
NNGCAGCTGTT-----
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCAGCTGCCVCGGG
-GCCAGCTGBTNB---
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGCAGCTGCCVCGGG
CAGCAGCTGN------
 A G T C A T C G A C T G A G T C G T C A A C T G A G T C A G C T A T C G A G T C A G T C T A C G G T A C C T A G A C T G A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T