Information for 3-CSYTCTGRGCCCAGCY (Motif 7)

A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C C A G T A C T G C T A G A T C G A G T C A G T C A G T C C G T A C T A G G T C A C T A G T A C G C T A G
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.757
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 19.6bp
Average Position of motif in Background67.7 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CSYTCTGRGCCCAGCY
CCTGCTGAGH------
 A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CSYTCTGRGCCCAGCY
-----TGGGGCCCAC-
 A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CSYTCTGRGCCCAGCY
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CSYTCTGRGCCCAGCY
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CSYTCTGRGCCCAGCY
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CSYTCTGRGCCCAGCY---
-------GGCCCCGCCCCC
 A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CSYTCTGRGCCCAGCY
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:11
Orientation:forward strand
Alignment:CSYTCTGRGCCCAGCY
-----------CAGCC
 A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CSYTCTGRGCCCAGCY
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CSYTCTGRGCCCAGCY-
-------TGCCCAGNHW
 A G T C A T G C G A T C A C G T A G T C A C G T A C T G C T A G A C T G T A G C A G T C G T A C G T C A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A