Information for 3-CTGNGGTGTCTTG (Motif 6)

A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
Reverse Opposite:
G T A C C G T A C T G A A C T G G C T A A G T C G T C A A G T C G T A C G C T A A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.825e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets36.9 +/- 18.4bp
Average Position of motif in Background40.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGNGGTGTCTTG
GCTGTGGTTT----
 A C G T A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGNGGTGTCTTG
ATGGGGTGAT---
 A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGNGGTGTCTTG
GTGGGGTGAT---
 A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGNGGTGTCTTG
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGNGGTGTCTTG
CTGTGGTTTN---
 A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGNGGTGTCTTG
GTGGCGTGACNG-
 A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGNGGTGTCTTG
GCTGTG--------
 A C G T A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGNGGTGTCTTG
GTCTGTGGTTT----
 A C G T A C G T A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTGNGGTGTCTTG--
----TGTGGATTNNN
 A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGNGGTGTCTTG
NNHTGTGGTTWN---
 A C G T A C G T A G T C A C G T A C T G C A G T A C T G C T A G A C G T A C T G C G A T G T A C A G C T A C G T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T