p-value: | 1e-7 |
log p-value: | -1.748e+01 |
Information Content per bp: | 1.697 |
Number of Target Sequences with motif | 8.0 |
Percentage of Target Sequences with motif | 1.24% |
Number of Background Sequences with motif | 34.4 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 34.4 +/- 22.2bp |
Average Position of motif in Background | 46.0 +/- 28.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCTAGCAACTMCCCCT SCCTAGCAACAG----- |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTAGCAACTMCCCCT TACCATAGCAACGGT---- |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CCTAGCAACTMCCCCT CCGCATAGCAACGGA---- |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -7 |
Orientation: | forward strand |
Alignment: | -------CCTAGCAACTMCCCCT TGTGACCCTTAGCAACCGATTAA |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTAGCAACTMCCCCT TGTTKCCTAGCAACM------ |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTAGCAACTMCCCCT GTTGCCATGGCAAC------- |
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PB0003.1_Ascl2_1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTAGCAACTMCCCCT- CTCAGCAGCTGCTACTG |
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SP4/MA0685.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CCTAGCAACTMCCCCT-- -TAAGCCACGCCCCCTTT |
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Myod1/MA0499.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCTAGCAACTMCCCCT ---TGCAGCTGTCCCT |
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Ascl2/MA0816.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CCTAGCAACTMCCCCT ---AGCAGCTGCT--- |
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