Information for 7-CTGTCAAAAT (Motif 25)

A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G C T C G A T C A T G T C G A T A G C C T G A C T A G
p-value:1e-7
log p-value:-1.829e+01
Information Content per bp:1.850
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif142.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets42.4 +/- 26.4bp
Average Position of motif in Background50.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCAAAAT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAAAAT
GCTGTCAA---
 A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAAAAT
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAAAAT
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAAAAT
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAAAAT
CCTGTCAA---
 A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAAAAT
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAAAAT
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAAAAT
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGTCAAAAT
NTGTCAN---
 A G T C A G C T A T C G A G C T G A T C C G T A C T G A C G T A C G T A A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T