Information for 6-GTWAGTTATG (Motif 24)

A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G
Reverse Opposite:
G T A C G T C A C A G T T C G A G T C A A T G C C G A T C G A T C T G A T A G C
p-value:1e-8
log p-value:-1.849e+01
Information Content per bp:1.767
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif76.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.0 +/- 25.5bp
Average Position of motif in Background46.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTWAGTTATG---
NNCTNAATTATGANN
 A C G T A C G T A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTWAGTTATG---
NCNTTTGTTATTTNN
 A C G T A C G T A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTWAGTTATG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTWAGTTATG----
GTNTTGTTGTGANNT
 A C G T A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTWAGTTATG---
NTGATTTATGGCC
 A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTWAGTTATG---
CATTAATTATTCAT
 A C G T A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTWAGTTATG---
-TGATTTATGGCC
 A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTWAGTTATG--------
-TNNATTATGCATANNTT
 A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTWAGTTATG--
-TGATTTATGGC
 A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

POU4F3/MA0791.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTWAGTTATG---
CTCATTAATTATGCAT
 A C G T A C G T A C G T A T C G A G C T G C T A C G T A A T C G A C G T A C G T G T C A A C G T A C T G A C G T A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T