Information for 10-GGGCTTCTTCACA (Motif 22)

A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G C G T A C G T A A C T G C G T A C T G A A C T G A G T C A G T C A G T C
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 26.8bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGCTTCTTCACA
--GCTTCC-----
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGGCTTCTTCACA----
------CTTCACACCTA
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GGGCTTCTTCACA----
-------TTMACACCTT
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGCTTCTTCACA-
--SCHTGTTTACAT
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T
A C G T A C G T T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGGCTTCTTCACA----
----NTTTTCACACCTT
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGGCTTCTTCACA--
---CNTGTTTACATA
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GGGCTTCTTCACA----
-------TTCACACCTT
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGGCTTCTTCACA--
-----HTTTCCCASG
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:GGGCTTCTTCACA---
------TTTCACACCT
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGGCTTCTTCACA-----
-NTNTTCTTATCAGTNTN
 A C T G A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A