Information for 1-AAAWGATTGMTAT (Motif 2)

T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T
Reverse Opposite:
C G T A A C G T C G T A C A T G A T G C G T C A C G T A A C G T A T G C G C A T A C G T C G A T A C G T
p-value:1e-15
log p-value:-3.521e+01
Information Content per bp:1.668
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif193.6
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets39.7 +/- 23.9bp
Average Position of motif in Background49.5 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAAWGATTGMTAT--
NNANTGATTGATNTTN
 A C G T T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAAWGATTGMTAT--
NNANTGATTGATNNNN
 A C G T T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAWGATTGMTAT
-TTTGATTGATGN
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAWGATTGMTAT---
-NNAGATNVNWATCTN
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T A C G T A C G T A C G T
A C G T C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAAWGATTGMTAT
--TTGATTGN---
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAAWGATTGMTAT
-----ATTGTTA-
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAWGATTGMTAT
CNGTGATTTN---
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAAWGATTGMTAT-
--ATGATKGATGRC
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAAWGATTGMTAT----
--NCNTTTGTTATTTNN
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAWGATTGMTAT---
AANTTATTGTTCTNNA
 T G C A C G T A T G C A C G T A A T C G T G C A G C A T A C G T A T C G G T A C C G A T G T C A G C A T A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A