Information for 7-CCTGWGAGAMWWGAGG (Motif 12)

A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
Reverse Opposite:
G T A C G A T C A C G T G T A C G C A T C G A T A C T G A G C T A G T C A C G T A G T C G C A T A T G C C G T A C A T G C T A G
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.703
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif125.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets59.0 +/- 25.8bp
Average Position of motif in Background45.4 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0021.1_Gata3_1/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTGWGAGAMWWGAGG-----
TTTTTAGAGATAAGAAATAAAG
 A C G T A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata4/MA0482.1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCTGWGAGAMWWGAGG
---NNGAGATAAGA--
 A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCTGWGAGAMWWGAGG
CTTGAGTGGCT-----
 A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCTGWGAGAMWWGAGG
----ANAGATAAGAA-
 A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CCTGWGAGAMWWGAGG
------AGATAAGA--
 A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCTGWGAGAMWWGAGG
AGGTGNCAGACAG----
 A C G T A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CCTGWGAGAMWWGAGG--
----GGAGAAAGGTGCGA
 A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCTGWGAGAMWWGAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCTGWGAGAMWWGAGG
CSTGGGAAAD------
 A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCTGWGAGAMWWGAGG
AGGTGHCAGACA-----
 A C G T A G T C G A T C C G A T A T C G C G T A A C T G C G T A C T A G C T G A G T A C G C T A C G T A A C T G C G T A C A T G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T