p-value: | 1e-16 |
log p-value: | -3.889e+01 |
Information Content per bp: | 1.807 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.08% |
Number of Background Sequences with motif | 1.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.4 +/- 20.0bp |
Average Position of motif in Background | 41.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | MCAGCCRTGGCTGACC GCAGCCAAGCGTGACN |
|
|
|
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | MCAGCCRTGGCTGACC SCAGYCADGCATGAC- |
|
|
|
PAX5/MA0014.2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----MCAGCCRTGGCTGACC GAGGGCAGCCAAGCGTGAC- |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | MCAGCCRTGGCTGACC- -----------TGACCT |
|
|
|
ESR2/MA0258.2/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | MCAGCCRTGGCTGACC- --AGGNCANNGTGACCT |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | MCAGCCRTGGCTGACC--- -----------TGACCYCT |
|
|
|
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer
Match Rank: | 7 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -MCAGCCRTGGCTGACC--- GGYAGCAYDTGCTDCCCNNN |
|
|
|
POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -MCAGCCRTGGCTGACC CACAGN----------- |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | MCAGCCRTGGCTGACC--- -----------TGACCTYA |
|
|
|
RORA/MA0071.1/Jaspar
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | MCAGCCRTGGCTGACC----- -----------TGACCTTGAT |
|
|
|