Information for 5-GVGGAGAAAGCGTGVC (Motif 5)

A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
Reverse Opposite:
A C T G A G C T A G T C C G T A A T G C A C T G A G T C C G A T A C G T A C G T A G T C A C G T A G T C A G T C A C G T G T A C
p-value:1e-12
log p-value:-2.840e+01
Information Content per bp:1.792
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 26.3bp
Average Position of motif in Background59.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GVGGAGAAAGCGTGVC
--TCAGNGAGCGTGAC
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GVGGAGAAAGCGTGVC
--------TGCGTG--
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GVGGAGAAAGCGTGVC---
----CAAAGGCGTGGCCAG
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GVGGAGAAAGCGTGVC-
---------NCGTGACN
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GVGGAGAAAGCGTGVC
-TGGAAAA--------
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GVGGAGAAAGCGTGVC
NNTGGAAANN-------
 A C G T A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GVGGAGAAAGCGTGVC
TGGGGA-----------
 A C G T A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GVGGAGAAAGCGTGVC
-------AAGCTTG--
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GVGGAGAAAGCGTGVC
AATGGAAAAT-------
 A C G T A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GVGGAGAAAGCGTGVC
-GGAACAAAGR-----
 A C T G T C G A A C T G A C T G C G T A C T A G G T C A T G C A C G T A C T A G G T A C A T C G A C G T C T A G T C G A A G T C
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T