Information for 14-CTGCAGTTAC (Motif 35)

A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C
Reverse Opposite:
A T C G G A C T C G T A C T G A A T G C A C G T A C T G A T G C G T C A T C A G
p-value:1e-6
log p-value:-1.445e+01
Information Content per bp:1.520
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 19.9bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTGCAGTTAC
-GGCVGTTR-
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCAGTTAC
TGGCAGTTGG
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGTTAC---
CACGGCAGTTGGTNN
 A C G T A C G T A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGTTAC---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGCAGTTAC
--GCACTTAA
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C
A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGCAGTTAC
BRRCVGTTDN
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGCAGTTAC
--BCMATTAG
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C
A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGTTAC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCAGTTAC-
-CGCAGCTGCG
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGCAGTTAC---
--NNACTTACCTN
 A G T C C A G T T A C G T G A C T G C A T A C G G A C T G C A T C T G A T A G C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G