Information for 3-GGGAGCCAGCACAGGA (Motif 3)

A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
Reverse Opposite:
A G C T A G T C A G T C A C G T A T C G A C G T A T C G T A G C A C G T A C T G A T C G A G T C C G A T A T G C G T A C A G T C
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 20.1bp
Average Position of motif in Background51.0 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGAGCCAGCACAGGA
-TGAGTCAGCA-----
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------GGGAGCCAGCACAGGA-
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGGAGCCAGCACAGGA
CGGAGC----------
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGGAGCCAGCACAGGA--------
----GCCASCAGGGGGCGCYVNNG
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.51
Offset:9
Orientation:reverse strand
Alignment:GGGAGCCAGCACAGGA
---------CACAGN-
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GGGAGCCAGCACAGGA
-----AAACCACAGC-
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGGAGCCAGCACAGGA-----
--TGGCCACCAGGGGGCGCTA
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGCCAGCACAGGA
AGAGRRACAGCWGAC--
 A C G T A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GGGAGCCAGCACAGGA------
--TGGCCACCAGGTGGCACTNT
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GGGAGCCAGCACAGGA
----NWAACCACADNN
 A C T G A C T G A T C G C G T A A C T G A T G C A G T C C G T A A T C G A T G C C G T A A T G C C G T A A C T G C T A G C T G A
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C