Information for 12-CAATTAAAGGAGA (Motif 27)

G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
Reverse Opposite:
A G C T A T G C A G C T T G A C A G T C A G C T C A G T C G A T C G T A T G C A A C G T C A G T A C T G
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.723
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif60.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets58.9 +/- 26.9bp
Average Position of motif in Background49.3 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAATTAAAGGAGA
CCAATTAA------
 A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAATTAAAGGAGA
ACAAGCAATTAATGAAT-
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAATTAAAGGAGA
ACAAGCAATTAATGAAT-
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAATTAAAGGAGA
CCAATTAA------
 A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAATTAAAGGAGA
ACAAGCAATTAAAGAAT-
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAATTAAAGGAGA
ACAAGCAATTAAAGAAT-
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAATTAAAGGAGA
CAATTAA------
 G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAATTAAAGGAGA
CCAATTAG------
 A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAATTAAAGGAGA
CCAATTAC------
 A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAATTAAAGGAGA
CCAATTAC------
 A C G T G T A C G C T A G T C A A C G T A C G T G C T A G T C A C T G A C T A G A C T G C T G A A T C G C T G A
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T